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Protein Refinement
MD Simulations
Web Server
ReFOLD3 Server
Refinement of 3D protein models using molecular dynamics simulations and quality assessment.
ReFOLD3
State-of-the-art MD-based refinement for 3D protein models. Combines molecular dynamics with quality assessment to improve prediction accuracy.
Web Server
MD Simulations
Quality Assessment
Top 10
CASP13 Refinement Method
ReFOLD4 protocol: Fine-grained restraint strategies guided by local quality estimation
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MD-based Refinement
Interactive Molecular Dynamics protocols to relax and optimize structures
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Quality Assessment
Integrates ModFOLD QA scores to select the best refined models
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Automated Pipeline
Simply upload your PDB file and let the server handle the rest
How to Use
1
Upload PDB model
2
Configure intensity
3
Run refinement
4
Download results